Charan Sai Ponnada

Charan Sai Ponnada

I build LLM systems and train genomic foundation models from scratch 🧬🤖⚡

 

2026 -
Aynstyn Technologies
I joined Aynstyn Technologies as an AI Engineer intern and converted to full-time Software Engineer on a PPO. I built LabSoft (Next.js, PostgreSQL) end-to-end as the sole developer, shipping the Patient Management and Reporting modules from schema design through deployment, and architected Aynstyn Intel, an internal analytics platform with Bloom's Taxonomy distribution tracking and knowledge-gap heatmaps. On the AI side I improved LLM response reliability across 3+ production workflows with systematic black-box test suites, and do prompt tuning and evaluation on our in-house agent built on Amazon's open-source Strands Agents SDK. I also own development and CI/CD for the React Native mobile app.
2026 -
G
I am building a genomic foundation model from scratch on a 2× NVIDIA L40S cluster — a HopField-Mamba hybrid that conditions pretraining directly on 3D chromatin (Hi-C) structure instead of adding it post-hoc. The structural bias lives inside the SSM recurrence at +0.43% parameter overhead, under a matched-compute constraint. Along the way I found a memory-horizon collapse in Mamba's default timestep initialization; fixing it raised median effective memory span ~30× with validation loss unchanged within seed noise, which is being written up on its own. I also have a sole-author paper under review at IEEE InCODE 2026 on semantic consistency as an unsupervised hallucination signal in LLMs.
2026
IIT Hyderabad
2nd place among the Top 10 finalists at the IIT Hyderabad AI/ML hackathon (YUVAAN 2026), out of 7,600+ registrants, with VIVIRITY Intelli-Credit. It reads 500+ page annual reports and turns them into loan risk assessments in under 5 minutes instead of days, on a non-embedding RAG pipeline that costs 98% less in API overhead than vector-based retrieval. Earlier that year I built a drone LiDAR to drainage network pipeline for the MoPR Geospatial Hackathon at IIT Tirupati.
2025
IEEE ISAECT 2025
My first IEEE paper, as primary author — Vision-Language Based Real-Time Assistive System for Outdoor Navigation of the Visually Impaired in Indian Urban Environments — was published at ISAECT 2025 in Mohali. I fine-tuned BLIP with a 3-stage LoRA strategy on a custom 427-scene dataset built from Google Street View imagery, for +15.6% across BLEU, METEOR, ROUGE and semantic similarity, and deployed it on a Raspberry Pi through an edge-cloud hybrid architecture. The model is on HuggingFace and the code is open-sourced.
2024 -
W
I write about AI on Medium and post explainers on my YouTube channel. Mostly notes from things I actually built and broke: fine-tuning vision-language models on almost no compute, retrieval that survives contact with production, loop engineering. For all the latest I am usually on 𝕏/Twitter or GitHub.
2023 - 2027
VRSEC
B.Tech in Artificial Intelligence and Data Science at Velagapudi Ramakrishna Siddhartha Engineering College (VRSEC), Vijayawada, at a CGPA of 8.69/10. Deep learning, computer vision and NLP, plus whatever I could teach myself in the gaps — which is where the papers, the hackathons and most of the projects below came from.
bio
Charan Sai Ponnada is an AI engineer and researcher in India. He ships LLM-powered features and full-stack platform modules in production at Aynstyn Technologies, and independently researches genomic foundation models and label-free evaluation of LLM hallucination. He is the primary author of an IEEE ISAECT 2025 paper on vision-language assistive navigation, and is finishing his B.Tech in AI and Data Science at VRSEC.

featured writing
I keep notes on the things I build, over on Medium. Here is the collection of the ones people seem to like:
projects
3
3D-Aware Genomic Foundation Model (HopField-Mamba) (in progress) An independent research project building a genomic foundation model from scratch on a 2x NVIDIA L40S cluster. The core idea is to condition self-supervised pretraining directly on 3D chromatin (Hi-C) structure, rather than bolting structure on after the fact the way the closest prior work does.
V
VIVIRITY Intelli-Credit An end-to-end AI credit intelligence system that reads annual reports and turns them into structured loan risk assessments. Built for YUVAAN 2026 at IIT Hyderabad, where it placed 2nd among the Top 10 finalists out of 7,600+ registrants. 98% lower API overhead than traditional vector-based retrieval, and extraction time down from multiple days of manual work to under 5 minutes. Placed 2nd among the Top 10 finalists at YUVAAN 2026, IIT Hyderabad, out of 7,600+ registrants. Code on GitHub.
L
LabSoft A production Next.js and PostgreSQL platform I designed and built end-to-end as the sole developer, shipping the Patient Management and Reporting modules from schema design through deployment. Two production modules shipped and running live, built and deployed solo.
A
Aynstyn Intel An internal analytics platform I architected at Aynstyn, giving admins real-time visibility into learner performance via Bloom’s Taxonomy distribution tracking, knowledge-gap heatmaps and cohort funnel analytics. Admins get real-time learner visibility instead of completion counts.
D
DTM — Drone LiDAR to Drainage Network Pipeline A full geospatial processing pipeline for the MoPR Geospatial Hackathon at IIT Tirupati: ground classification, DTM interpolation, hydrology modeling and drainage network design, running on real drone LiDAR data. A working end-to-end pipeline from raw drone LiDAR to a designed drainage network, with a waterlogging-risk classifier over real terrain data. Code on GitHub.
C
Collaborative Sync Engine (in progress) A real-time collaborative text-editing engine being built from scratch using a CRDT (RGA) approach, chosen over operational transforms for provable convergence correctness in a solo build.
P
Payment Processing Engine (in progress) A payment processing engine designed around an idempotent charge API backed by a double-entry ledger rather than a mutable balance field, so financial correctness holds under retries and concurrent requests.
More of these, and whatever I am building this week, on GitHub.
publications
IEEE ISAECT 2025
Charan Sai Ponnada, Divya Kothapalli, Karthik Goparaju, Sanath Pedapudi
IEEE InCODE 2026 (under review)
Charan Sai Ponnada

Abstracts and BibTeX are on the publications page.
misc unsorted